HL_7S9U_061

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S9U_061 not in the Motif Atlas

Geometric match to HL_4QLM_001

Geometric discrepancy: 0.1696

The information below is about HL_4QLM_001

Detailed Annotation

GNRA

Broad Annotation

GNRA

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7S9U|1|A|C|2823
7S9U|1|A|G|2824
7S9U|1|A|C|2825
7S9U|1|A|A|2826
7S9U|1|A|A|2827
7S9U|1|A|G|2828

Current chains

Chain A

RNA (2436-MER)

Nearby chains