HL_7SA4_030

3D structure

PDB id

7SA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7SA4|1|1|U|1173, 7SA4|1|1|U|1174, 7SA4|1|1|A|1175, 7SA4|1|1|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SA4_030 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3011

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7SA4|1|1|C|1172
7SA4|1|1|U|1173
7SA4|1|1|U|1174
7SA4|1|1|A|1175
7SA4|1|1|U|1176
7SA4|1|1|G|1177

Current chains

Chain 1

23S ribosomal RNA

Nearby chains