HL_7SAE_014

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7SAE|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_014 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.2326

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7SAE|1|A|G|457
7SAE|1|A|G|458
7SAE|1|A|A|459
7SAE|1|A|C|460
7SAE|1|A|C|461
7SAE|1|A|A|462
7SAE|1|A|U|463
7SAE|1|A|C|464

Current chains

Chain A

RNA (2434-MER)

Nearby chains