HL_7SAE_019

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGAAGAU

Length

7 nucleotides

Bulged bases

7SAE|1|A|A|659

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_019 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.2522

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

7SAE|1|A|A|656
7SAE|1|A|G|657
7SAE|1|A|A|658
7SAE|1|A|A|659
7SAE|1|A|G|660
7SAE|1|A|A|661
7SAE|1|A|U|662

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain E

50S ribosomal protein L4