HL_7SAE_027

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGAUAAGAU

Length

10 nucleotides

Bulged bases

7SAE|1|A|U|1004, 7SAE|1|A|G|1007

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_027 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.3091

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46211.1

Basepair signature

cWW-cWW-tSW-F

Number of instances in this motif group

10

Unit IDs

7SAE|1|A|G|1000
7SAE|1|A|U|1001
7SAE|1|A|G|1002
7SAE|1|A|A|1003
7SAE|1|A|U|1004
7SAE|1|A|A|1005
7SAE|1|A|A|1006
7SAE|1|A|G|1007
7SAE|1|A|A|1008
7SAE|1|A|U|1009

Current chains

Chain A

RNA (2434-MER)

Nearby chains