HL_7SAE_052

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

7SAE|1|A|A|2297, 7SAE|1|A|C|2304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SAE_052 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.1497

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7SAE|1|A|C|2293
7SAE|1|A|U|2294
7SAE|1|A|A|2295
7SAE|1|A|A|2296
7SAE|1|A|A|2297
7SAE|1|A|A|2298
7SAE|1|A|G|2299
7SAE|1|A|G|2300
7SAE|1|A|U|2301
7SAE|1|A|A|2302
7SAE|1|A|A|2303
7SAE|1|A|C|2304
7SAE|1|A|G|2305

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain V

50S ribosomal protein L27