HL_7SFR_032

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUGUG

Length

6 nucleotides

Bulged bases

7SFR|1|A|G|1306

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_032 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2821

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7SFR|1|A|C|1303
7SFR|1|A|U|1304
7SFR|1|A|U|1305
7SFR|1|A|G|1306
7SFR|1|A|U|1307
7SFR|1|A|G|1308

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15