HL_7SFR_088

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GCUUAAC

Length

7 nucleotides

Bulged bases

7SFR|1|a|U|610

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SFR_088 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.1515

The information below is about HL_4LFB_014

Detailed Annotation

GNRA-like with tWH

Broad Annotation

GNRA

Motif group

HL_27656.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

5

Unit IDs

7SFR|1|a|G|608
7SFR|1|a|C|609
7SFR|1|a|U|610
7SFR|1|a|U|611
7SFR|1|a|A|612
7SFR|1|a|A|613
7SFR|1|a|C|614

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16