3D structure

PDB id
7SFR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmethylated Mtb Ribosome 50S with SEQ-9
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
GUUAAGUC
Length
8 nucleotides
Bulged bases
7SFR|1|a|G|1085
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7SFR_098 not in the Motif Atlas
Homologous match to HL_6CZR_096
Geometric discrepancy: 0.2318
The information below is about HL_6CZR_096
Detailed Annotation
T-loop related
Broad Annotation
T-loop
Motif group
HL_77436.4
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
24

Unit IDs

7SFR|1|a|G|1080
7SFR|1|a|U|1081
7SFR|1|a|U|1082
7SFR|1|a|A|1083
7SFR|1|a|A|1084
7SFR|1|a|G|1085
7SFR|1|a|U|1086
7SFR|1|a|C|1087

Current chains

Chain a
16S rRNA

Nearby chains

Chain g
30S ribosomal protein S7

Coloring options:


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