HL_7SFR_108
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUCCCAUUCCGAACC
- Length
- 15 nucleotides
- Bulged bases
- 7SFR|1|B|U|40
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SFR_108 not in the Motif Atlas
- Homologous match to HL_8C3A_228
- Geometric discrepancy: 0.1747
- The information below is about HL_8C3A_228
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50688.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
7SFR|1|B|G|33
7SFR|1|B|U|34
7SFR|1|B|C|35
7SFR|1|B|C|36
7SFR|1|B|C|37
7SFR|1|B|A|38
7SFR|1|B|U|39
7SFR|1|B|U|40
7SFR|1|B|C|41
7SFR|1|B|C|42
7SFR|1|B|G|43
7SFR|1|B|A|44
7SFR|1|B|A|45
7SFR|1|B|C|46
7SFR|1|B|C|47
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L31
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
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