HL_7SS9_002
3D structure
- PDB id
- 7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G partially dissociated (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGAUAUGAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SS9_002 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.3625
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7SS9|1|1|G|86
7SS9|1|1|U|87
7SS9|1|1|G|88
7SS9|1|1|A|89
7SS9|1|1|U|90
7SS9|1|1|A|91
7SS9|1|1|U|92
7SS9|1|1|G|93
7SS9|1|1|A|94
7SS9|1|1|A|95
7SS9|1|1|C|96
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain t
- 50S ribosomal protein L23
- Chain u
- 50S ribosomal protein L24
- Chain y
- 50S ribosomal protein L29
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