HL_7SS9_028
3D structure
- PDB id
- 7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G partially dissociated (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCGUAAUAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SS9_028 not in the Motif Atlas
- Geometric match to HL_6CF2_001
- Geometric discrepancy: 0.3895
- The information below is about HL_6CF2_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87553.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7SS9|1|1|G|1091
7SS9|1|1|C|1092
7SS9|1|1|G|1093
7SS9|1|1|U|1094
7SS9|1|1|A|1095
7SS9|1|1|A|1096
7SS9|1|1|U|1097
7SS9|1|1|A|1098
7SS9|1|1|G|1099
7SS9|1|1|C|1100
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 8
- Elongation factor G
- Chain F
- 50S ribosomal protein L36
- Chain f
- 50S ribosomal protein L6
- Chain i
- 50S ribosomal protein L11
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