HL_7SS9_111
3D structure
- PDB id
- 7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G partially dissociated (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SS9_111 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.2637
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 10
Unit IDs
7SS9|1|1|C|1092
7SS9|1|1|G|1093
7SS9|1|1|U|1094
7SS9|1|1|A|1095
7SS9|1|1|A|1096
7SS9|1|1|U|1097
7SS9|1|1|A|1098
7SS9|1|1|G|1099
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 8
- Elongation factor G
- Chain F
- 50S ribosomal protein L36
- Chain f
- 50S ribosomal protein L6
- Chain i
- 50S ribosomal protein L11
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