HL_7SSL_015

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUAG

Length

4 nucleotides

Bulged bases

7SSL|1|1|A|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSL_015 not in the Motif Atlas

Geometric match to HL_9DFE_023

Geometric discrepancy: 0.3994

The information below is about HL_9DFE_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

7SSL|1|1|U|545
7SSL|1|1|U|546
7SSL|1|1|A|547
7SSL|1|1|G|548

Current chains

Chain 1

23S rRNA

Nearby chains

Chain r

50S ribosomal protein L21