HL_7SSL_037

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7SSL|1|1|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSL_037 not in the Motif Atlas

Geometric match to HL_8C3A_196

Geometric discrepancy: 0.3854

The information below is about HL_8C3A_196

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23696.2

Basepair signature

cWW-F-F

Number of instances in this motif group

8

Unit IDs

7SSL|1|1|C|1533
7SSL|1|1|U|1534
7SSL|1|1|A|1535
7SSL|1|1|C|1536
7SSL|1|1|G|1537
7SSL|1|1|G|1538

Current chains

Chain 1

23S rRNA

Nearby chains