HL_7SSL_053
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 7SSL|1|1|A|2268, 7SSL|1|1|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SSL_053 not in the Motif Atlas
- Homologous match to HL_7RQB_054
- Geometric discrepancy: 0.1495
- The information below is about HL_7RQB_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.6
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7SSL|1|1|C|2264
7SSL|1|1|U|2265
7SSL|1|1|A|2266
7SSL|1|1|A|2267
7SSL|1|1|A|2268
7SSL|1|1|G|2269
7SSL|1|1|A|2270
7SSL|1|1|G|2271
7SSL|1|1|U|2272
7SSL|1|1|A|2273
7SSL|1|1|A|2274
7SSL|1|1|C|2275
7SSL|1|1|G|2276
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain m
- 50S ribosomal protein L16
- Chain w
- 50S ribosomal protein L27
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