HL_7SSN_029
3D structure
- PDB id
- 7SSN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GACGCUUAUGCGUU
- Length
- 14 nucleotides
- Bulged bases
- 7SSN|1|1|A|1175
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SSN_029 not in the Motif Atlas
- Geometric match to HL_3SKL_006
- Geometric discrepancy: 0.3302
- The information below is about HL_3SKL_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7SSN|1|1|G|1168
7SSN|1|1|A|1169
7SSN|1|1|C|1170
7SSN|1|1|G|1171
7SSN|1|1|C|1172
7SSN|1|1|U|1173
7SSN|1|1|U|1174
7SSN|1|1|A|1175
7SSN|1|1|U|1176
7SSN|1|1|G|1177
7SSN|1|1|C|1178
7SSN|1|1|G|1179
7SSN|1|1|U|1180
7SSN|1|1|U|1181
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L15
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