HL_7SSN_105
3D structure
- PDB id
- 7SSN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 7SSN|1|6|G|18, 7SSN|1|6|G|19, 7SSN|1|6|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SSN_105 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.1889
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SSN|1|6|C|13
7SSN|1|6|A|14
7SSN|1|6|G|15
7SSN|1|6|C|16
7SSN|1|6|C|17
7SSN|1|6|U|17|||A
7SSN|1|6|G|18
7SSN|1|6|G|19
7SSN|1|6|U|20
7SSN|1|6|A|21
7SSN|1|6|G|22
Current chains
- Chain 6
- tRNA fMet
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: