HL_7SSO_042

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

7SSO|1|1|U|1729, 7SSO|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSO_042 not in the Motif Atlas

Homologous match to HL_5J7L_176

Geometric discrepancy: 0.4003

The information below is about HL_5J7L_176

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

7SSO|1|1|C|1727
7SSO|1|1|C|1728
7SSO|1|1|U|1729
7SSO|1|1|C|1730
7SSO|1|1|G|1731
7SSO|1|1|C|1732
7SSO|1|1|G|1733

Current chains

Chain 1

23S rRNA

Nearby chains