HL_7SSO_065

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7SSO|1|1|G|2751, 7SSO|1|1|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSO_065 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.102

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7SSO|1|1|C|2745
7SSO|1|1|U|2746
7SSO|1|1|G|2747
7SSO|1|1|A|2748
7SSO|1|1|A|2749
7SSO|1|1|A|2750
7SSO|1|1|G|2751
7SSO|1|1|C|2752
7SSO|1|1|A|2753
7SSO|1|1|U|2754
7SSO|1|1|C|2755
7SSO|1|1|U|2756
7SSO|1|1|A|2757
7SSO|1|1|A|2758
7SSO|1|1|G|2759

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6