HL_7SSO_107
3D structure
- PDB id
- 7SSO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUUCAAAUCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SSO_107 not in the Motif Atlas
- Homologous match to HL_5EL4_223
- Geometric discrepancy: 0.3695
- The information below is about HL_5EL4_223
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23827.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7SSO|1|6|G|52
7SSO|1|6|G|53
7SSO|1|6|U|54
7SSO|1|6|U|55
7SSO|1|6|C|56
7SSO|1|6|A|57
7SSO|1|6|A|58
7SSO|1|6|A|59
7SSO|1|6|U|60
7SSO|1|6|C|61
7SSO|1|6|C|62
Current chains
- Chain 6
- tRNA fMet
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: