HL_7SSW_001
3D structure
- PDB id
- 7SSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G dissociated (Structure VI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGCUAAUCUGC
- Length
- 12 nucleotides
- Bulged bases
- 7SSW|1|1|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SSW_001 not in the Motif Atlas
- Geometric match to HL_4V83_139
- Geometric discrepancy: 0.3142
- The information below is about HL_4V83_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53597.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
7SSW|1|1|G|58
7SSW|1|1|U|59
7SSW|1|1|G|60
7SSW|1|1|C|61
7SSW|1|1|U|62
7SSW|1|1|A|63
7SSW|1|1|A|64
7SSW|1|1|U|65
7SSW|1|1|C|66
7SSW|1|1|U|67
7SSW|1|1|G|68
7SSW|1|1|C|69
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain t
- 50S ribosomal protein L23
- Chain y
- 50S ribosomal protein L29
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