HL_7SSW_022

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGAAAGGC

Length

9 nucleotides

Bulged bases

7SSW|1|1|A|781

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSW_022 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.2211

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

7SSW|1|1|G|778
7SSW|1|1|U|779
7SSW|1|1|G|780
7SSW|1|1|A|781
7SSW|1|1|A|782
7SSW|1|1|A|783
7SSW|1|1|G|784
7SSW|1|1|G|785
7SSW|1|1|C|786

Current chains

Chain 1

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L2