HL_7SSW_058

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7SSW|1|1|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSW_058 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.1803

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7SSW|1|1|U|2404
7SSW|1|1|G|2405
7SSW|1|1|A|2406
7SSW|1|1|A|2407
7SSW|1|1|U|2408
7SSW|1|1|G|2409
7SSW|1|1|G|2410
7SSW|1|1|A|2411
7SSW|1|1|A|2412
7SSW|1|1|G|2413

Current chains

Chain 1

23S rRNA

Nearby chains

Chain l

50S ribosomal protein L15