HL_7ST2_048

3D structure

PDB id

7ST2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7ST2|1|1|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ST2_048 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.0667

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7ST2|1|1|G|1949
7ST2|1|1|G|1950
7ST2|1|1|U|1951
7ST2|1|1|A|1952
7ST2|1|1|A|1953
7ST2|1|1|G|1954
7ST2|1|1|U|1955
7ST2|1|1|U|1956
7ST2|1|1|C|1957

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 3

Small subunit ribosomal RNA; SSU rRNA

Chain k

50S ribosomal protein L14