HL_7ST6_121

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

7ST6|1|3|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ST6_121 not in the Motif Atlas

Geometric match to HL_7MLW_004

Geometric discrepancy: 0.3474

The information below is about HL_7MLW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_83003.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

7ST6|1|3|C|341
7ST6|1|3|C|342
7ST6|1|3|U|343
7ST6|1|3|A|344
7ST6|1|3|C|345
7ST6|1|3|G|346
7ST6|1|3|G|347
7ST6|1|3|G|348

Current chains

Chain 3

16S rRNA

Nearby chains

Chain k

50S ribosomal protein L14

Chain p

50S ribosomal protein L19