HL_7ST7_024
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UCAUCCCGA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ST7_024 not in the Motif Atlas
- Geometric match to HL_4V88_198
- Geometric discrepancy: 0.2071
- The information below is about HL_4V88_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7ST7|1|1|U|884
7ST7|1|1|C|885
7ST7|1|1|A|886
7ST7|1|1|U|887
7ST7|1|1|C|888
7ST7|1|1|C|889
7ST7|1|1|C|890
7ST7|1|1|G|891
7ST7|1|1|A|892
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain X
- 30S ribosomal protein S19
- Chain e
- 50S ribosomal protein L5
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