HL_7SUK_006

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GGAAUAAGGGUUCGAUU

Length

17 nucleotides

Bulged bases

7SUK|1|8|G|365, 7SUK|1|8|G|371, 7SUK|1|8|G|372, 7SUK|1|8|U|374, 7SUK|1|8|U|375

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SUK|1|8|G|364
7SUK|1|8|G|365
7SUK|1|8|A|366
7SUK|1|8|A|367
7SUK|1|8|U|368
7SUK|1|8|A|369
7SUK|1|8|A|370
7SUK|1|8|G|371
7SUK|1|8|G|372
7SUK|1|8|G|373
7SUK|1|8|U|374
7SUK|1|8|U|375
7SUK|1|8|C|376
7SUK|1|8|G|377
7SUK|1|8|A|378
7SUK|1|8|U|379
7SUK|1|8|U|380

Current chains

Chain 8

18S pre-rRNA

Nearby chains

Chain 6

U3 small nucleolar ribonucleoprotein protein LCP5

Chain L4

40S ribosomal protein S4-A

Chain L9

40S ribosomal protein S9-A