HL_7SUK_012
3D structure
- PDB id
- 7SUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- GGUGCC
- Length
- 6 nucleotides
- Bulged bases
- 7SUK|1|8|U|563
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SUK_012 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.1779
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.7
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 22
Unit IDs
7SUK|1|8|G|561
7SUK|1|8|G|562
7SUK|1|8|U|563
7SUK|1|8|G|564
7SUK|1|8|C|565
7SUK|1|8|C|566
Current chains
- Chain 8
- 18S pre-rRNA
Nearby chains
- Chain SI
- Ribosome biogenesis protein BMS1
- Chain SM
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain SR
- 40S ribosomal protein S23-A
- Chain ST
- Nucleolar complex protein 14
- Chain SY
- U3 small nucleolar RNA-associated protein 11
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