HL_7SUK_015

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GAUGAUCAGAUACCGUC

Length

17 nucleotides

Bulged bases

7SUK|1|8|U|999, 7SUK|1|8|U|1004, 7SUK|1|8|A|1005

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SUK|1|8|G|994
7SUK|1|8|A|995
7SUK|1|8|U|996
7SUK|1|8|G|997
7SUK|1|8|A|998
7SUK|1|8|U|999
7SUK|1|8|C|1000
7SUK|1|8|A|1001
7SUK|1|8|G|1002
7SUK|1|8|A|1003
7SUK|1|8|U|1004
7SUK|1|8|A|1005
7SUK|1|8|C|1006
7SUK|1|8|C|1007
7SUK|1|8|G|1008
7SUK|1|8|U|1009
7SUK|1|8|C|1010

Current chains

Chain 8

18S pre-rRNA

Nearby chains

Chain NJ

rRNA biogenesis protein RRP5