HL_7SUK_030

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

UAAUA

Length

5 nucleotides

Bulged bases

7SUK|1|L0|A|302, 7SUK|1|L0|U|304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SUK_030 not in the Motif Atlas

Geometric match to HL_4ZT0_005

Geometric discrepancy: 0.1323

The information below is about HL_4ZT0_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.1

Basepair signature

cWW-F

Number of instances in this motif group

51

Unit IDs

7SUK|1|L0|U|301
7SUK|1|L0|A|302
7SUK|1|L0|A|303
7SUK|1|L0|U|304
7SUK|1|L0|A|305

Current chains

Chain L0

5' ETS

Nearby chains

Chain LO

Periodic tryptophan protein 2

Chain LT

U3 small nucleolar RNA-associated protein 21

Chain LW

U3 small nucleolar RNA-associated protein 7