HL_7SUK_034

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

CAGAGAUUUCAG

Length

12 nucleotides

Bulged bases

7SUK|1|L0|G|554, 7SUK|1|L0|A|555, 7SUK|1|L0|U|582, 7SUK|1|L0|U|583

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SUK|1|L0|C|550
7SUK|1|L0|A|551
7SUK|1|L0|G|552
7SUK|1|L0|A|553
7SUK|1|L0|G|554
7SUK|1|L0|A|555
7SUK|1|L0|U|582
7SUK|1|L0|U|583
7SUK|1|L0|U|584
7SUK|1|L0|C|585
7SUK|1|L0|A|586
7SUK|1|L0|G|587

Current chains

Chain L0

5' ETS

Nearby chains

Chain LP

U3 small nucleolar RNA-associated protein 6

Chain LS

U3 small nucleolar RNA-associated protein 18

Chain SQ

rRNA-processing protein FCF2

Chain SS

U3 small nucleolar RNA-associated protein 14