HL_7SYV_017

3D structure

PDB id

7SYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

7SYV|1|2|U|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYV|1|2|C|884
7SYV|1|2|U|885
7SYV|1|2|A|886
7SYV|1|2|U|887
7SYV|1|2|U|888
7SYV|1|2|U|889
7SYV|1|2|U|890
7SYV|1|2|G|891
7SYV|1|2|U|892
7SYV|1|2|U|893
7SYV|1|2|G|894
7SYV|1|2|G|895
7SYV|1|2|U|896
7SYV|1|2|U|897
7SYV|1|2|U|898
7SYV|1|2|U|899
7SYV|1|2|C|900
7SYV|1|2|G|901
7SYV|1|2|G|902

Current chains

Chain 2

18S rRNA

Nearby chains

Chain H

eS6

Chain M

uS17