HL_7SYV_045

3D structure

PDB id

7SYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUGCGAGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYV|1|z|C|304
7SYV|1|z|U|305
7SYV|1|z|U|306
7SYV|1|z|G|307
7SYV|1|z|C|308
7SYV|1|z|G|309
7SYV|1|z|A|310
7SYV|1|z|G|311
7SYV|1|z|U|312
7SYV|1|z|G|313

Current chains

Chain z

HCV IRES

Nearby chains

Chain b

eS26

Chain d

eS28