HL_7TOQ_064

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

7TOQ|1|A25S|U|1974

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|G|1973
7TOQ|1|A25S|U|1974
7TOQ|1|A25S|G|1975
7TOQ|1|A25S|G|1976
7TOQ|1|A25S|C|1977
7TOQ|1|A25S|C|1978
7TOQ|1|A25S|A|1979
7TOQ|1|A25S|U|1980
7TOQ|1|A25S|G|1981
7TOQ|1|A25S|G|1982
7TOQ|1|A25S|A|1983
7TOQ|1|A25S|A|1984
7TOQ|1|A25S|G|1985
7TOQ|1|A25S|U|1986
7TOQ|1|A25S|C|1987
7TOQ|1|A25S|G|1988
7TOQ|1|A25S|G|1989
7TOQ|1|A25S|A|1990
7TOQ|1|A25S|A|1991
7TOQ|1|A25S|U|1992
7TOQ|1|A25S|C|1993

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL12

60S ribosomal protein L12