HL_7TOQ_066
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG
- Length
- 40 nucleotides
- Bulged bases
- 7TOQ|1|A25S|C|2094, 7TOQ|1|A25S|A|2104, 7TOQ|1|A25S|A|2105, 7TOQ|1|A25S|U|2267, 7TOQ|1|A25S|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|C|2087
7TOQ|1|A25S|A|2088
7TOQ|1|A25S|G|2089
7TOQ|1|A25S|U|2090
7TOQ|1|A25S|C|2091
7TOQ|1|A25S|G|2092
7TOQ|1|A25S|G|2093
7TOQ|1|A25S|C|2094
7TOQ|1|A25S|A|2095
7TOQ|1|A25S|G|2096
7TOQ|1|A25S|A|2097
7TOQ|1|A25S|G|2098
7TOQ|1|A25S|C|2099
7TOQ|1|A25S|G|2100
7TOQ|1|A25S|A|2101
7TOQ|1|A25S|G|2102
7TOQ|1|A25S|A|2103
7TOQ|1|A25S|A|2104
7TOQ|1|A25S|A|2105
7TOQ|1|A25S|G|2106
7TOQ|1|A25S|A|2107
7TOQ|1|A25S|G|2108
7TOQ|1|A25S|A|2109
7TOQ|1|A25S|G|2110
7TOQ|1|A25S|U|2111
7TOQ|1|A25S|G|2112
7TOQ|1|A25S|G|2113
7TOQ|1|A25S|C|2258
7TOQ|1|A25S|G|2259
7TOQ|1|A25S|C|2260
7TOQ|1|A25S|G|2261
7TOQ|1|A25S|G|2262
7TOQ|1|A25S|A|2263
7TOQ|1|A25S|C|2264
7TOQ|1|A25S|G|2265
7TOQ|1|A25S|C|2266
7TOQ|1|A25S|U|2267
7TOQ|1|A25S|A|2268
7TOQ|1|A25S|C|2269
7TOQ|1|A25S|G|2270
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain AL04
- 60S ribosomal protein L4
- Chain AL06
- 60S ribosomal protein L6
- Chain AL07
- uL30
- Chain AL18
- eL18
- Chain AL29
- eL29
- Chain AL32
- 60S ribosomal protein L32
- Chain EL28
- 60S ribosomal protein L28
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