HL_7TOQ_112

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

7TOQ|1|A58S|U|124, 7TOQ|1|A58S|C|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A58S|G|121
7TOQ|1|A58S|G|122
7TOQ|1|A58S|U|123
7TOQ|1|A58S|U|124
7TOQ|1|A58S|C|125
7TOQ|1|A58S|C|126
7TOQ|1|A58S|U|127
7TOQ|1|A58S|C|128
7TOQ|1|A58S|C|129

Current chains

Chain A58S

5.8S rRNA

Nearby chains

Chain A25S

Large subunit ribosomal RNA; LSU rRNA

Chain AL25

uL23