HL_7TOR_041
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 7TOR|1|A28S|G|294, 7TOR|1|A28S|A|295, 7TOR|1|A28S|A|296
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOR_041 not in the Motif Atlas
- Homologous match to HL_8C3A_008
- Geometric discrepancy: 0.1393
- The information below is about HL_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7TOR|1|A28S|C|289
7TOR|1|A28S|U|290
7TOR|1|A28S|U|291
7TOR|1|A28S|G|292
7TOR|1|A28S|G|293
7TOR|1|A28S|G|294
7TOR|1|A28S|A|295
7TOR|1|A28S|A|296
7TOR|1|A28S|U|297
7TOR|1|A28S|G|298
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL13
- 60S ribosomal protein L13
- Chain AL15
- 60S ribosomal protein L15
- Chain AL28
- 60S ribosomal protein L27a
- Chain AL42
- eL42
Coloring options: