HL_7TOR_051
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UACGAAA
- Length
- 7 nucleotides
- Bulged bases
- 7TOR|1|A28S|A|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOR_051 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3934
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
7TOR|1|A28S|U|1364
7TOR|1|A28S|A|1368
7TOR|1|A28S|C|1369
7TOR|1|A28S|G|1370
7TOR|1|A28S|A|1371
7TOR|1|A28S|A|1372
7TOR|1|A28S|A|1373
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain A58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AL04
- 60S ribosomal protein L4
- Chain AL13
- 60S ribosomal protein L13
- Chain AL15
- 60S ribosomal protein L15
- Chain AL26
- 60S ribosomal protein L26
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