HL_7TOR_111
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CACUUG
- Length
- 6 nucleotides
- Bulged bases
- 7TOR|1|A58S|U|110, 7TOR|1|A58S|U|111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOR_111 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.1579
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7TOR|1|A58S|C|107
7TOR|1|A58S|A|108
7TOR|1|A58S|C|109
7TOR|1|A58S|U|110
7TOR|1|A58S|U|111
7TOR|1|A58S|G|112
Current chains
- Chain A58S
- 5.8S rRNA
Nearby chains
- Chain A28S
- Large subunit ribosomal RNA; LSU rRNA
- Chain AL25
- uL23
- Chain AL37
- 60S ribosomal protein L37
- Chain AL39
- 60S ribosomal protein L39
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