HL_7TOS_001
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOS_001 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.1192
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7TOS|1|16S|U|12
7TOS|1|16S|U|13
7TOS|1|16S|U|14
7TOS|1|16S|G|15
7TOS|1|16S|A|16
7TOS|1|16S|U|17
7TOS|1|16S|C|18
7TOS|1|16S|A|19
7TOS|1|16S|U|20
7TOS|1|16S|G|21
7TOS|1|16S|G|22
Current chains
- Chain 16S
- 16S ribosomal RNA
Nearby chains
- Chain S05
- 30S ribosomal protein S5
- Chain S12
- 30S ribosomal protein S12
Coloring options: