HL_7TOS_009

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7TOS|1|16S|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TOS_009 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1036

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

7TOS|1|16S|C|342
7TOS|1|16S|U|343
7TOS|1|16S|A|344
7TOS|1|16S|C|345
7TOS|1|16S|G|346
7TOS|1|16S|G|347

Current chains

Chain 16S

16S ribosomal RNA

Nearby chains

Chain L14

50S ribosomal protein L14

Chain L19

50S ribosomal protein L19