HL_7TOS_026

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

7TOS|1|16S|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TOS_026 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2036

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOS|1|16S|G|1134
7TOS|1|16S|U|1135
7TOS|1|16S|C|1136
7TOS|1|16S|C|1137
7TOS|1|16S|G|1138
7TOS|1|16S|G|1139
7TOS|1|16S|C|1140

Current chains

Chain 16S

16S ribosomal RNA

Nearby chains

Chain S09

30S ribosomal protein S9