HL_7TOS_030
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 7TOS|1|16S|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOS_030 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1501
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7TOS|1|16S|G|1356
7TOS|1|16S|A|1357
7TOS|1|16S|U|1358
7TOS|1|16S|C|1359
7TOS|1|16S|A|1360
7TOS|1|16S|G|1361
7TOS|1|16S|A|1362
7TOS|1|16S|A|1363
7TOS|1|16S|U|1364
7TOS|1|16S|G|1365
7TOS|1|16S|C|1366
Current chains
- Chain 16S
- 16S ribosomal RNA
Nearby chains
- Chain S09
- 30S ribosomal protein S9
- Chain S10
- 30S ribosomal protein S10
- Chain S14
- 30S ribosomal protein S14
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