HL_7TOS_093

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TOS_093 not in the Motif Atlas

Geometric match to HL_4WF9_058

Geometric discrepancy: 0.1434

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7TOS|1|23S|C|2551
7TOS|1|23S|U|2552
7TOS|1|23S|G|2553
7TOS|1|23S|U|2554
7TOS|1|23S|U|2555
7TOS|1|23S|C|2556
7TOS|1|23S|G|2557

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains