HL_7TOS_108

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACGCCAGU

Length

8 nucleotides

Bulged bases

7TOS|1|23S|C|2145, 7TOS|1|23S|C|2146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOS|1|23S|A|2142
7TOS|1|23S|C|2143
7TOS|1|23S|G|2144
7TOS|1|23S|C|2145
7TOS|1|23S|C|2146
7TOS|1|23S|A|2147
7TOS|1|23S|G|2148
7TOS|1|23S|U|2149

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains

Chain S11

30S ribosomal protein S11