HL_7TTU_014

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7TTU|1|1|G|457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_014 not in the Motif Atlas

Geometric match to HL_7A0S_014

Geometric discrepancy: 0.1306

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7TTU|1|1|G|456
7TTU|1|1|G|457
7TTU|1|1|A|458
7TTU|1|1|C|459
7TTU|1|1|C|460
7TTU|1|1|A|461
7TTU|1|1|U|462
7TTU|1|1|C|463

Current chains

Chain 1

23S rRNA

Nearby chains