HL_7TTU_019

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGUAAAU

Length

7 nucleotides

Bulged bases

7TTU|1|1|A|658

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_019 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.1485

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7TTU|1|1|A|655
7TTU|1|1|G|656
7TTU|1|1|U|657
7TTU|1|1|A|658
7TTU|1|1|A|659
7TTU|1|1|A|660
7TTU|1|1|U|661

Current chains

Chain 1

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L4