HL_7TTU_024

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAGAAAUUC

Length

9 nucleotides

Bulged bases

7TTU|1|1|A|826

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_024 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.1519

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7TTU|1|1|G|823
7TTU|1|1|A|824
7TTU|1|1|G|825
7TTU|1|1|A|826
7TTU|1|1|A|827
7TTU|1|1|A|828
7TTU|1|1|U|829
7TTU|1|1|U|830
7TTU|1|1|C|831

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2