HL_7TTU_047

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7TTU|1|1|U|1982

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_047 not in the Motif Atlas

Geometric match to HL_5J7L_182

Geometric discrepancy: 0.1137

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7TTU|1|1|G|1976
7TTU|1|1|G|1977
7TTU|1|1|U|1978
7TTU|1|1|A|1979
7TTU|1|1|A|1980
7TTU|1|1|G|1981
7TTU|1|1|U|1982
7TTU|1|1|U|1983
7TTU|1|1|C|1984

Current chains

Chain 1

23S rRNA

Nearby chains

Chain W

50S ribosomal protein L14